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dbVar: Study Browser

Study Organism Study Type Method Number of Variant Regions Number of Variant Calls Publication
nstd1humanControl SetPaired-end mapping297297Tuzun et al. 2005
nstd2humanControl SetPaired-end mapping7,45810,950Kidd et al. 2008
nstd3rhesus macaqueControl SetOligo aCGH123214Lee et al. 2008
nstd4humanControl SetOligo aCGH2,94917,817Perry et al. 2008
nstd5mouseControl SetOligo aCGH79206Graubert et al. 2007
nstd6humanControl SetSequence alignment415,434415,434Mills et al. 2006
nstd7mouseControl SetOligo aCGH1,3335,211Cahan et al. 2009
nstd8chimpanzeeControl SetBAC aCGH7914,501Perry et al. 2008b
nstd8humanControl SetBAC aCGH7914,501Perry et al. 2008b
nstd9chimpanzeeControl SetBAC aCGH359659Perry et al. 2006
nstd10dogControl SetOligo aCGH6773,997Nicholas et al. 2009
nstd11humanTumor vs. Matched-NormalSNP array211211Walter et al. 2009
nstd12humanCase-SetSNP array3,3967,429Marshall et al. 2008
nstd13dogControl SetOligo aCGH57152Chen et al. 2009
nstd14humanControl SetSNP array368368Cooper et al. 2008
nstd15mouseControl SetOligo aCGH2,0942,094Cutler et al. 2007
nstd16humanControl SetPaired-end mapping1,2971,297Korbel et al. 2007
nstd17humanControl SetSNP genotyping analysis935935Conrad et al. 2006
nstd18mouseControl SetOligo aCGH, ROMA39862Egan et al. 2007
nstd19mouseControl SetPaired-end mapping, Read-depth analysis7,3937,393Quinlan et al. 2010
nstd20humanControl SetSNP genotyping analysis5393,905McCarroll et al. 2006
nstd21humanControl SetSNP array13,56654,462Shaikh et al. 2009
nstd22humanControl SetSNP array1,3190McCarroll et al. 2008
nstd23humanControl SetMLPA, Sequence alignment1010Young et al. 2008
nstd24pigControl SetOligo aCGH37145Fadista et al. 2008
nstd25fruit flyControl SetOligo aCGH1,5851,585Dopman et al. 2007
nstd26fruit flyControl SetOligo aCGH3,6393,639Emerson et al. 2008
nstd27humanControl SetSNP genotyping analysis13,84313,843Itsara et al. 2009
nstd28humanCase-SetOligo aCGH66Zhang et al. 2009
nstd29humanControl SetBAC aCGH388388Locke et al. 2006
nstd30humanControl SetSNP genotyping analysis1,4283,436Jakobsson et al. 2008
nstd31humanControl SetRead-depth analysis226607Alkan et al. 2009
nstd32humanControl SetBAC aCGH1192,504Sharp et al. 2005
nstd33humanCase-SetOligo aCGH44Sharp et al. 2007
nstd34humanControl SetOligo aCGH100100Hinds et al. 2006
nstd35humanControl SetOEA assembly, Paired-end mapping, Sequencing9,8257,163Kidd et al. 2010
nstd36humanCase-SetOligo aCGH, Sequencing397794Mitsui et al. 2010
nstd37humanCase-SetOligo aCGH8,68712,923ISCA
nstd39humanControl SetRead-depth analysis187187Schuster et al. 2010
nstd40humanCase-ControlBAC aCGH689689Sharp et al. 2006
nstd41humanCase-ControlBAC aCGH255255Iafrate et al. 2004
nstd42humanCase-SetOligo aCGH, qPCR111Sharp et al. 2008
nstd43humanControl SetOligo aCGH, SNP array, Sequencing1,3181,333Kim et al. 2009
nstd44pigControl SetSNP genotyping analysis4949Ramayo-Caldas et al. 2010
nstd45humanCuratedCurated5784ISCA curated dataset
nstd46humanControl SetOligo aCGH, PCR, qPCR1,1831,183Campbell et al. 2011
nstd47humanControl SetSequencing1,1671,167Kidd et al. 2010b
nstd48mouseControl SetOligo aCGH7,09030,795Henrichsen et al. 2009
nstd49humanControl SetOptical mapping4,2057,032Teague et al. 2010
nstd50humanControl SetPaired-end mapping, SNP array2,6422,642Wilson et al. 2010
nstd51humanCuratedCurated4545User submitted curated variants
nstd52humanCase-SetSNP array11Watkins et al. 2011
nstd53humanCase-ControlOligo aCGH9003,277Tuttelmann et al. 2011
nstd54humanCase-ControlOligo aCGH, SNP array81,345468,909Cooper et al. 2011
nstd55humanControl SetSequencing79XueZhang et al. 2011
nstd56cattleControl SetFISH, Oligo aCGH, qPCR1771,039Liu et al. 2010
nstd57horseControl SetOligo aCGH, Sequencing193,625193,625Doan et al. 2011
nstd58humanControl SetSNP array77Forsberg et al. 2012
nstd59humanCase-SetSequencing11Lopez-Herrera et al. 2012
nstd60cattleControl SetSNP array, qPCR6823,666Hou et al. 2011
nstd61cattleCase-ControlSNP array, qPCR5791,179Hou et al. 2011b
nstd62zebrafishControl SetOligo aCGH6,08031,749Brown et al. 2012
nstd63sorghumControl SetSequencing32,24632,261Zheng et al. 2011
nstd64humanControl SetSNP array1,3832,987Wang et al. 2007
nstd65humanControl SetSequencing1,2991,299Ju et al. 2010
nstd66humanControl SetROMA81239Sebat et al. 2004
nstd67humanControl SetOligo aCGH7,95020,099Park et al. 2010
nstd68humanControl SetBAC aCGH5,13214,709Wong et al. 2007
nstd69cattleControl SetFISH, Sequencing, qPCR1,2654,697Bickhart et al. 2012
nstd70mouseControl SetSequencing525763Yasuda et al. 2012
nstd71humanControl SetSNP array45,084102,212Xu et al. 2011
estd1humanControl SetBAC aCGH, SNP array1,43325,193Redon et al. 2006
estd3humanControl SetSequencing2,6822,682Wang et al. 2008
estd19humanControl SetSequencing4,2984,298Ahn et al. 2009
estd20humanControl SetOligo aCGH20,20651,981Conrad et al. 2009
estd21humanControl SetOligo aCGH2323Wheeler et al. 2008
estd22humanControl SetOligo aCGH, SNP array780,358780,358Levy et al. 2007
estd24humanControl SetOligo aCGH1,4699,282de Smith et al. 2007
estd48humanControl SetPCR10Stefansson et al. 2005
estd49humanControl SetSNP array, SNP genotyping analysis19629Gusev et al. 2009
estd50humanCase-ControlFISH20Giglio et al. 2002
estd55humanControl SetSNP array9767,077Pinto et al. 2007
estd59humanControl SetSequencing218,0392,150,366Durbin et al. 2010
estd118mouseControl SetSequencing711,915977,261Keane et al. 2011
estd176humanControl SetSNP array7341,081Banerjee et al. 2011
estd180humanControl SetOligo aCGH, SNP array, Sequencing23,88723,887Pang et al. 2010
estd185mouseControl SetPCR, Sequencing1,4535,920Yalcin et al. 2012
estd186humanCase-SetOligo aCGH, SNP array, qPCR33Thevenon et al. 2012
estd188humanControl SetBAC aCGH, Oligo aCGH, SNP array60,24760,247Pinto et al. 2011
estd193humanControl SetFISH, PCR33Feuk et al. 2005
estd194humanControl SetSequencing504,912504,912Bentley et al. 2008
estd195humanControl SetSNP array856159,337Altshuler et al. 2010
estd196humanControl SetSNP array, qPCR335335Simon-Sanchez et al. 2007
estd197humanControl SetSequencing232,775232,775McKernan et al. 2009
estd198humanControl SetKaryotyping, Merging, PCR, SNP array, Sequencing381399Chia et al. 2012
estd199humanControl SetMerging, Oligo aCGH, PCR, SNP array, Sequencing22,5311,202,929McVean et al. 2012
estd200mouseControl SetMerging, Sequencing30,04461,903Wong et al. 2012
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