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Grants and Funding: Extramural Programs (EP)

Fiscal Year 2012 Awards

Below is a list of new and continuing grant awards made by NLM in fiscal year 2012. The list is sorted by grant program. Multi-year projects will appear each year in which funds are awarded. New investigators are investigators who have not previously received a significant NIH independent research grant. Early Stage investigators are new investigators in the first 10 years of their research career. Click the grant number to read the abstract and other information about a grant.

Grant Programs

Research Projects (R01)

Baldi, Pierre
Efficient Data Structures and Algorithms for Genomics Sequence Data
5 R01 LM010235-03
University of California Irvine

Bigger, John Thomas
Developing Flexible EHR Plug-ins to Re-Engineer Clinical Care and Research Workfl
5 R01 LM010815-03
Columbia University Health Sciences

Brownstein, John S
A Platform for Modeling the Global Impact of Climate Change on Infectious Disease
3 R01 LM010812-02S1
Children's Hospital Boston

Brownstein, John S
A Platform for Modeling the Global Impact of Climate Change on Infectious Disease
5 R01 LM010812-03
Children's Hospital Boston

Bui, Alex
RUMI: A Patient Portal for Retrieving Understandable Medical Information
1 R01 LM011333-01
University of California Los Angeles

Burnside, Elizabeth S
Integrating Machine Learning and Physician Expertise for Breast Cancer Diagnosis
5 R01 LM010921-02
University of Wisconsin Madison

Chapman, Wendy W
Interactive Search and Review of Clinical Records with Multi-layered Semantic Annotation
5 R01 LM010964-02
University of California San Diego

Friedman, Carol
Pharmacovigilence using Natural Language Processing, Statistics, and the EHR
5 R01 LM010016-04
Columbia University Health Sciences

Gopalakrishnan, Vanathi
Bayesian Rule Learning Methods for Disease Prediction and Biomarker Discovery
5 R01 LM010950-02
University of Pittsburgh at Pittsburgh

Hunter, Lawrence E
Technology Development for a MolBio Knowledge-base
5 R01 LM008111-08
University of Colorado Denver

Koyuturk, Mehmet (New Investigator)
Enhancing Genome-Wide Association Studies via Integrative Network Analysis
1 R01 LM011247-01A1
Case Western Reserve University

Liu, Gilbert C
Delivering Geospatial Intelligence to Health Care Professionals
5 R01 LM010923-02
Indiana Univ-Purdue Univ at Indianapolis

Liu, Yin
Bayesian Methods in Signal Transduction Network Analysis
5 R01 LM010022-02
University of Texas Hlth Sci Ctr Houston

Malin, Bradley A
Automated Detection of Anomalous Accesses to Electronic Health Records
5 R01 LM010207-04
Vanderbilt University

Mandl, Kenneth D
Active Patient Participation in a Disease Registry for Comparative Effectiveness
1 R01 LM011185-01
Children's Hospital Boston

Nakhleh, Luay
Evolutionary Analysis of Bacterial Genomes: High-Throughput Computational Tools
5 R01 LM009494-05
Rice University

Pestian, John P
Multi-Institutional Pediatric Epilepsy Decision Support
5 R01 LM011124-02
Children's Hospital Medical Center Cinci

Reis, Ben Y
Intelligent Histories: Detecting Personalized Risk with Longitudinal Surveillance
5 R01 LM009879-04
Children's Hospital Boston

Saltz, Joel H
Informatics for Integrative Brain Tumor Whole Slide Analysis
5 R01 LM011119-02
Emory University

Sodickson, Aaron
Automated Radiation Monitoring and Decision Support to Reduce Cumulative Exposure
5 R01 LM010679-03
Brigham and Women's Hospital

Tagare, Hemant D
Fast 3D Reconstruction Algorithms for Cryo-EM
5 R01 LM010142-03
Yale University

Turner, Anne M
Improving Access to Multi-Lingual Health Information through Machine Translation
5 R01 LM010811-03
University of Washington

Weng, Chunhua
Bridging the Semantic Gap Between Research Eligibility Criteria and Clinical Data
2 R01 LM009886-04
Columbia University Health Sciences

Xu, Hua
Real-time Disambiguation of Abbreviations in Clinical Notes
5 R01 LM010681-03
Vanderbilt University

Ye, Jieping
Computational Methods for Expression Image Analysis
5 R01 LM010730-02
Arizona State University-tempe Campus

Zeng, Qing
Assist Patients with Medication Decisions
1 R01 LM011334-01
University of Utah

Zhao, Zhongming (New Investigator)
Mapping the Genetic Architecture of Complex Disease via RNA-seq and GWAS Data
1 R01 LM011177-01
Vanderbilt University

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Exploratory/Developmental Research (R21)

Blum, James Marlow
Exploring the Feasibility of Computational Markers to Predict Atrial Fibrillation
1 R21 LM011026-01A1
University of Michigan at Ann Arbor

Edwards, John R
A Machine Learning Approach for Fine-Scale Genome Wide DNA Methylation Analysis
1 R21 LM011199-01
Washington University

Jacquez, Geoffrey M
Exploratory Evaluation of Homomorphic Cryptography for Confidentiality Protection
1 R21 LM011132-01A1
Biomedware

Quarles, John Patrick
A Mixed Reality Conscious Sedation Simulator for Learning to Manage Variability
5 R21 LM010829-02
University of Texas San Antonio

Segall, Noa
Toward Intelligent Display of Health Data:  A Qualitative Study of use Patterns
5 R21 LM010700-02
Duke University

Syed, Zeeshan Hassan
Exploring the Feasibility of Approximate Sequential Pattern Discovery in Massive
5 R21 LM010954-02
University of Michigan at Ann Arbor

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Small Research Projects (R03)

Leroy, Gondy
Large-Scale Evaluation of Text Features Affecting Perceived and Actual Text Difficulty for Online Health Information Consumers
5 R03 LM010902-02
Claremont Graduate University

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NLM Informatics Conference (R13)

Bashshur, Rashid L
Best Practices in Telemedicine Symposium-Workshop
1 R13 LM011263-01
University of Michigan at Ann Arbor

Dunker, Alan Keith
Pacific Symposium on Biocomputing
5 R13 LM006766-16
Indiana Univ-Purdue Univ at Indianapolis

Wong, Bang T
VizBi: A Conference on Visualization in Biology
5 R13 LM010987-02
Broad Institute, Inc.

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Biomedical Informatics Research Resource (P41)

Jurka, Jerzy Wladyslaw
Repbase Update- A Database of Repetitive Sequences
5 P41 LM006252-15
Genetic Information Research Institute

Markley, John L
Biological Magnetic Resonance Data Bank
5 P41 LM005799-17
University of Wisconsin Madison

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Applied Informatics Resource (G08)

Brownstein, John S
HealthMap: Knowledge Management for Emerging Infectious Disease Intelligence
3 G08 LM009776-03S2
Children's Hospital Boston

Chung, Bowen
DREW_UCLA Connect_Community Partnered Resources to Improve Depression Outcomes
5 G08 LM011058-02
LA Biomed Res Inst/ Harbor UCLA Med Ctr

Pirie, Phyllis L
Reaching a Wider audience: Modifying NetWellness Content and Outreach
5 G08 LM011075-02
Ohio State University

Plovnick, Robert Matthew
Using Medical Informatics Principles to Enhance Development and Dissemination of
5 G08 LM010710-03
American Psychiatric Foundation

Shyu, Chi-ren
Cyber Informatics Tools for Lymphedema Stakeholders
5 G08 LM010711-03
University of Missouri-columbia

Tooey, Mary Joan
NLM Information Resouce Grants to Reduce Health Disparities
5 G08 LM011079-02
University of Maryland Baltimore

Wu, Cathy H
Linking Text Mining and Data Mining for Biomedical Knowledge Discovery
5 G08 LM010720-03
University of Delaware

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NLM Grants for Scholarly Works in Biomedicine and Health (G13)

Blanc, Paul D
New Technologies, Novel Diseases; Industrial Illness in 20th Century Rayon Manufacturing
5 G13 LM010076-02
University of California San Francisco

Greene, Jeremy A
When is a Medicine Good Enough? The Problem of Therapeutic Equivalence, 1959-2009
1 G13 LM010890-01A1
Johns Hopkins University

Hirshbein, Laura D
Smoking and Mental Illness in the United States:  A History
5 G13 LM010186-03
University of Michigan at Ann Arbor

Meyer-Baese, Anke
Biomedical Signal Analysis: Contemporary Methods and Applications
5 G13 LM009832-03
Florida State University

Morabia, Alfredo
History of Epidemiology: Evolution and Contribution to Medicine and Public Health
1 G13 LM010884-01A1
Queens College

Nathanson, Constance Allen
Disaster and the Reinvention of Public Health in France
1 G13 LM010931-01A1
Columbia University Health Sciences

Pruitt, Lisa J
"Crippled": A History of Childhood Disability in America, 1860-1980
5 G13 LM009862-03
Middle Tennessee State University

Webb, James Lewis Adrian
Malaria in Africa: A History of Infections and Interventions, 1900-2010
5 G13 LM010888-02
Colby College

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NIH Pathway to Independence Award (K99, R00)

Bekhuis, Tanja Catharina
Screening Nonrandomized Studies for Inclusion in Systematic Reviews of Evidence
4 R00 LM010943-02
University of Pittsburgh at Pittsburgh

Cami, Aurel B
Mapping the Drugome: Predictive Network Approaches to Drug Safety Surveillance
5 K99 LM011014-02
Children's Hospital Boston

Fusaro, Vincent A
Repurposing Electronic Health Data for Serendipitous Therapy Discovery
5 K99 LM011020-02
Harvard University (Medical School)

Jiang, Xia
Detecting Genome Wide Epistasis with Efficient Bayesian Network Learning
4 R00 LM010822-03
University of Pittsburgh at Pittsburgh

Nahm, Meredith
Pioneering Health Information Quality (K99)
1 K99 LM011128-01A1
Duke University

Salzman, Peter
Statistical & Computational Tools for Reconstruction of Gene Regulatory Networks
3 R00 LM009477-04S1
University of Rochester

Scotch, Matthew
Informatics for Zoonotic Disease Surveillance: Combining Animal and Human Data
5 R00 LM009825-05
Arizona State University-Tempe Campus

Solti, Imre
Increasing Clinical Trial Enrollment: A Semi-Automated Patient Centered Approach
5 R00 LM010227-05
Children's Hospital Medical Center Cinci

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University Biomedical Informatics Research Training Programs (T15)

Altman, Russ Biagio
Biomedical Informatics Training at Stanford
2 T15 LM007033-29
Stanford University

Bass, Ellen J
Systems Engineering Focus on Clinical Informatics
3 T15 LM009462-05S1
University of Virginia Charlottesville

Craven, Mark W
Computation and Informatics in Biology and Medicine
2 T15 LM007359-11
University of Wisconsin Madison

Crowley, Rebecca S
Pittsburgh Biomedical Informatics Training Program
2 T15 LM007059-26
University of Pittsburgh at Pittsburgh

Demiris, George
Biomedical and Health Informatics Training Program
2 T15 LM007442-11
University of Washington

Gadd, Cynthia S
Vanderbilt Biomedical Informatics Training Program
2 T15 LM007450-11
Vanderbilt University

Gorry, Tony
NLM Training Program in Biomedical Informatics for Predoc & Postdoctoral Fellows
2 T15 LM007093-21
Rice University

Hersh, William R
Biomedical Informatics Research Training at Oregon Health & Science University
2 T15 LM007088-21
Oregon Health and Science University

Hripcsak, George M
Training in Biomedical Informatics at Columbia University
3 T15 LM007079-19S2
Columbia University Health Sciences

Hripcsak, George M
Training in Biomedical Informatics at Columbia University
2 T15 LM007079-21
Columbia University Health Sciences

Hunter, Lawrence E
Colorado Biomedical Informatics Training Program
2 T15 LM009451-06
University of Colorado Denver

Hurdle, John F
University of Utah Biomedical Informatics Training Grant
2 T15 LM007124-16
University of Utah

McCray, Alexa T
Boston-Area Research Training Program in Biomedical Informatics
2 T15 LM007092-21
Harvard University (Medical School)

Miller, Perry L
Biomedical Informatics Research Training at Yale
2 T15 LM007056-26
Yale University

Ohno-Machado, Lucila
San Diego Biomedical Informatics Education & Research (SABER)
1 T15 LM011271-01
University of California San Diego

Payne, Philip Richard Orrin
The OSU Clinical and Translational Research Informatics Training Program (CTRIP)
1 T15 LM011270-01
Ohio State University

Phillips, George Neal
Research Training for Computation and Informatics in Biology and Medicine
3 T15 LM007359-10S1
University of Wisconsin Madison

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NIH Summer Research Experience Programs (R25)

Baldi, Pierre
UCI BIT Undergraduate Summer Research (BIT-SR) Program
5 R25 LM011170-02
University of California Irvine

Gadd, Cynthia S
Vanderbilt Biomedical Informatics Summer Research Experience Program
5 R25 LM011174-02
Vanderbilt University

Hersh, William R
OHSU Summer Internship in Biomedical Informatics for College Undergraduates
5 R25 LM011168-02
Oregon Health and Science University

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Small Business Innovation Research (SBIR) and Small Business Technology Transfer (STTR) Awards (R41, R42, R43, R44)

Bajpai, Gaurav
Development of a Clinical Robotic Device for Diagnosis, Rehabilitation and Treatment-Prediction of Knee Injuries
3 R43 LM011328-01S1
Techno-Sciences, Inc.

Bock, Robert
The Climate Change and Health Gateway (CCHG) for Enhancing Biomedical, Health, an
1 R43 LM011404-01
Lumenetec, LLC

Kim Young-Seok
Mobile Cadaver Lab: An Innovative Platform to Supplement Medical Education for Mobile Devices
1 R43 LM011412-01
Tactus Technologies, Inc.

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2012 NIH Director's Pioneer Award Program (DP1)

Covert, Markus W
A Gene-Complete Computational Model of Yeast
8 DP1 LM011510-04
Stanford University

Samudrala, Ram
Novel Paradigms for Drug Discovery: Computational Multitarget Screening
8 DP1 LM011509-03
University of Washington

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Biomedical Information Science and Technology Initiative (BISTI) Awards (U54)

Kohane, Isaac S
Informatics for Integrating Biology & the Bedside (i2b2)
3 U54 LM008748-09S2
Brigham and Women's Hospital

Kohane, Isaac S
Informatics for Integrating Biology & the Bedside (i2b2)
5 U54 LM008748-09
Brigham and Women's Hospital

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