Zebrafish (
Danio rerio) is a small (4-5 cm in length) tropical fresh-water fish native to rivers of northern India, northern Pakistan, Nepal, and Bhutan in South Asia. This species has several advantages as a tool in research, including a short generation time, production of large clutches of eggs, external fertilization, and rapid embryogenesis,
More...which is similar to that of higher vertebrates, that can be monitored through the transparent egg. Zebrafish is a widely used model organism for genetic studies in vertebrate development, developmental biology, and a variety of human congenital and genetic diseases. Less... 
Danio rerio Zv9The reference sequence (RefSeq) genome assembly is provided by NCBI using assembly instructions provided by the Wellcome Trust Sanger Institute. The assembled genome is distributed internationally by FTP and can be viewed in browsers provided by NCBI, Ensembl, and the University of Santa Cruz (UCSC). |
Type
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Name
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RefSeq
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INSDC
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Size (Mb)
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GC%
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Protein
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rRNA
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tRNA
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Other RNA
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Gene
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Pseudogene
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| master WGS | - | CABZ00000000.1 | 1,400.97 | 36.9 | 21,309 | - | - | - | - | 156 | | | Chr | 1 | NC_007112.5 | CU651604.3 | 60.35 | 36.4 | 1,320 | - | 33 | 41 | 1,379 | 50 | | | Chr | 2 | NC_007113.5 | CU651605.3 | 60.3 | 36.7 | 1,270 | - | 117 | 41 | 1,340 | 59 | | | Chr | 3 | NC_007114.5 | CU651606.3 | 63.27 | 36.9 | 1,435 | - | 392 | 63 | 1,503 | 53 | | | Chr | 4 | NC_007115.5 | CU651607.3 | 62.09 | 37.7 | 1,156 | - | 5,981 | 110 | 1,362 | 146 | | | Chr | 5 | NC_007116.5 | CU651608.3 | 75.68 | 36.5 | 1,469 | - | 427 | 53 | 1,511 | 30 | | | Chr | 6 | NC_007117.5 | CU651609.3 | 59.94 | 36.4 | 1,086 | - | 56 | 33 | 1,140 | 61 | | | Chr | 7 | NC_007118.5 | CU651610.3 | 77.28 | 36.8 | 1,542 | - | 81 | 51 | 1,565 | 66 | | | Chr | 8 | NC_007119.5 | CU651611.3 | 56.18 | 36.6 | 1,100 | - | 507 | 27 | 1,140 | 31 | | | Chr | 9 | NC_007120.5 | CU651612.3 | 58.23 | 36.5 | 926 | - | 73 | 30 | 960 | 22 | | | Chr | 10 | NC_007121.5 | CU651613.3 | 46.59 | 36.6 | 997 | - | 13 | 50 | 1,063 | 50 | | | Chr | 11 | NC_007122.5 | CU651614.3 | 46.66 | 36.4 | 915 | - | 17 | 36 | 917 | 22 | | | Chr | 12 | NC_007123.5 | CU651615.3 | 50.7 | 36.3 | 940 | - | 213 | 35 | 987 | 44 | | | Chr | 13 | NC_007124.5 | CU651616.3 | 54.09 | 36.5 | 944 | - | 133 | 26 | 970 | 23 | | | Chr | 14 | NC_007125.5 | CU651617.3 | 53.73 | 36.6 | 1,007 | - | 13 | 33 | 1,043 | 37 | | | Chr | 15 | NC_007126.5 | CU651618.3 | 47.44 | 36.8 | 982 | - | 142 | 38 | 1,032 | 40 | | | Chr | 16 | NC_007127.5 | CU651619.3 | 58.78 | 36.5 | 1,203 | - | 14 | 44 | 1,250 | 38 | | | Chr | 17 | NC_007128.5 | CU651620.3 | 53.98 | 36.6 | 930 | - | 144 | 20 | 966 | 38 | | | Chr | 18 | NC_007129.5 | CU651621.3 | 49.88 | 36.5 | 795 | - | 6 | 27 | 831 | 29 | | | Chr | 19 | NC_007130.5 | CU651622.3 | 50.25 | 36.4 | 996 | - | 9 | 35 | 1,038 | 32 | | | Chr | 20 | NC_007131.5 | CU651623.3 | 55.95 | 36.6 | 1,060 | - | 383 | 30 | 1,087 | 22 | | | Chr | 21 | NC_007132.5 | CU651624.3 | 44.54 | 36.5 | 965 | - | 505 | 30 | 1,004 | 30 | | | Chr | 22 | NC_007133.5 | CU651625.3 | 42.26 | 37.1 | 1,039 | - | 671 | 50 | 1,114 | 53 | | | Chr | 23 | NC_007134.5 | CU651626.3 | 46.39 | 36.7 | 910 | - | 11 | 39 | 947 | 23 | | | Chr | 24 | NC_007135.5 | CU651627.3 | 43.95 | 36.3 | 775 | - | 7 | 21 | 798 | 21 | | | Chr | 25 | NC_007136.5 | CU651628.3 | 38.5 | 36.6 | 854 | - | 73 | 26 | 887 | 24 | | | Chr | MT | NC_002333.2 | AC024175.3 | 0.016596 | 39.9 | 13 | 2 | 22 | - | 37 | - | | | Un | - | . | - | 55.41 | 39.4 | 775 | - | 2,841 | 37 | 899 | 108 | |
Click on chromosome name to open MapViewer  Chromosomes [1]  Scaffolds or contigs [0]  SRA or Traces [1]  No data [2] |
| Epigenomics | 14 | | Other | 5 | | Transcriptome or Gene expression | 234 | | Variation | 7 |
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