Resource Details

NCI-provided portal to multiple analysis programs for microarraydata. Permits the exchange of tools and discussion of their utility.Tools include:

• XML-DBMS: middleware for transferring data between XML documents and relational databases
• J-Express: Java implementation of hierarchical clustering, self organized maps, and principal component analysis.
• Stanford Microarray Analysis Suite: Cluster program performs a variety of cluster analysis on large microarray datasets, including hierarchical clustering and self-organizing maps. TreeView analysis allows user to graphically browse results of clustering analyses from Cluster.
• Weinstein Laboratory Microarray Analysis Suite: Upload your own data set and generate a Color-Coded Clustered Image Map.
• BRB ArrayTools Microarray Analysis Package: DNA microarray gene expression data analysis tools