Data Access
What would you like to do?
Query public databases for protein, pathway, gene annotation, and image information
Search the database of protein sequences
(Available through the Protein Information Resource hosted at Georgetown University)
Search database of signaling pathways for biomolecular interactions and key cellular processes
(Available through the Pathway Interaction Database)
Search database of genome annotations integrated with clinical outcomes
(Available through cancer Bioinformatics Infrastructure Objects hosted by multiple entities)
Access in vivo DICOM medical images with clinical and genomic data
(Available through the NCI-hosted instance of the National Biomedical Imaging Archive)
Create query templates that allow easy search and retrieval of microarray data (from caArray), imaging data (from the National Biomedical Imaging Archive), specimen data (from caTissue) and nanoparticle data (from caNanoLab) across caGrid
View and download genomic and clinical data from a wide variety of cancer types
Access genomic/clinical data on glioblastoma multiforme (GBM) and ovarian tumors
(Available through The Cancer Genome Atlas)
Access primary brain tumor data matched to molecular and clinical data
(Available through the Repository for Molecular Brain Neoplasia Data)
Access pre-surgical brain tumor MRI images matched to gene expression data
(Available through Visually Accessible Rembrandt Images)
Access human genes that have associations with cancer
(Available through the Cancer Gene Index)
Access prostate and breast cancer SNPs
(Available through Cancer Genetic Markers of Susceptibility)
Access gene expression/genomic characterizations and gene sequencing data for acute lymphoblastic and myeloid leukemias (ALL and AML), neuroblastoma, osteosarcoma, and high-risk Wilms tumor in children
(Available through Therapeutically Applicable Research to Generate Effective Treatments)
- Learn about the Therapeutically Applicable Research to Generate Effective Treatments (TARGET) project
- Visit the TARGET website
- Visit the TARGET Data Portal
- Browse the open-access TARGET data
- Apply for authorized access to the controlled-access TARGET data
- Access the TARGET data through the Authorized Access system
Access microarray-based gene expression data, images, SNPs, and patient outcome data from multiple studies
(Available through NCI-hosted instance of caIntegrator)
Access microarray gene expression data across a variety of cancers
(Available through NCI-hosted instance of caArray)
- Learn more about caArray
- Review a complete list of all available microarray datasets
- Register for free access to download and analyze this data
Sample Data: GlaxoSmithKline has generated and donated SNP and expression data for over 300 cancer cell lines and made this information available through caArray.
Query database of animal models for human cancers
Search database of animal models for human cancer that include design information, genetic descriptions, histopathology, images, microarray data, and other information
(Available through the NCI-hosted instance of the cancer Models Database)
Query database of nanoparticle information
Access nanoparticle samples, protocols, and publications (publicly available)
(Available through NCI-hosted instance of caNanoLab)
- Learn about caNanoLab
- Visit the caNanoLab website
- Browse caNanoLab samples, protocols, and publications
