• National Cancer Institute
  • National Human Genome Research Institute

The Cancer Genome Atlas

Publications

All data generated by The Cancer Genome Atlas (TCGA) Research Network are made open to the public through the Data Coordinating Center and the TCGA Data Portal. The following is a growing list of publications from the TCGA Research Network (designated with an *) and from other investigators who have successfully leveraged the TCGA data for their own work.

All data generated by The Cancer Genome Atlas (TCGA) Research Network are made open to the public through the Data Coordinating Center and the TCGA Data Portal.

View Publications by Cancer Type


* = TCGA Research Network

  • Lee, H.K., Bier, A., Cazacu, S., Finniss, S., Xiang, C., Twito, H., Poisson, L.M., Mikkelsen, T., Slavin, S., Jacoby, E., et al. (2013) MicroRNA-145 is downregulated in glial tumors and regulates glioma cell migration by targeting connective tissue growth factor. PLoS One. 8(2):e54652. Read the full article
  • Kapur, P., Peña-Llopis, S., Christie, A., Zhrebker, L., Pavía-Jiménez, A., Rathmell, W.K., Xie, X.J. and Brugarolas, J. (2013) Effects on survival of BAP1 and PBRM1 mutations in sporadic clear-cell renal-cell carcinoma: a retrospective analysis with independent validation. Lancet Oncol. 14(2):159-167. View PubMed abstract
  • Li, Q., Seo, J.-H., Stranger, B., McKenna, A., Pe’er, I., LaFramboise, T., Brown, M., Tyekucheva, S. and Freedman, M.L. (2013) Integrative eQTL-based analyses reveal the biology of breast cancer risk loci. Cell. 152(3):633-641. View PubMed abstract
  • Kreth, S., Limbeck, E., Hinske, L.C., Schütz SV, Thon, N., Hoefig, K., Egensperger, R. and Kreth, F.W. (2013) In human glioblastomas transcript elongation by alternative polyadenylation and miRNA targeting is a potent mechanism of MGMT silencing. Acta Neuropathol. doi: 10.1007/s00401-013-1081-1. View PubMed abstract
  • Tang, W., Duan, J., Zhang, J.G. and Wang, Y.P. (2013) Subtyping glioblastoma by combining miRNA and mRNA expression data using compressed sensing-based approach. EURASIP J Bioinform Syst Biol. 2013(1):2, doi:10.1186/1687-4153-2013-2. Read the full article
  • Guessous, F., Alvarado-Velez, M., Marcinkiewicz, L., Zhang, Y., Kim, J., Heister, S., Kefas, B., Godlewski, J., Schiff, D., Purow, B., et al. (2013) Oncogenic effects of miR-10b in glioblastoma stem cells. J Neurooncol. doi: 10.1007/s11060-013-1047-0 . View PubMed abstract
  • Sohn, I. and Sung, C.O. (2013) Predictive modeling using a somatic mutational profile in ovarian high grade serous carcinoma. PLoS One. 8(1):e54089. Read the full article
  • Qiu, S., Lin, S., Hu, D., Feng, Y., Tan, Y. and Peng, Y. (2013) Interactions of miR-323/miR-326/miR-329 and miR-130a/miR-155/miR-210 as prognostic indicators for clinical outcome of glioblastoma patients. J Transl Med. 11(1):10. Read the full article
  • Gu, Y., Wang, H., Qin, Y., Zhang, Y., Zhao, W., Qi, L., Zhang, Y., Wang, C. and Guo, Z. (2013) Network analysis of genomic alteration profiles reveals co-altered functional modules and driver genes for glioblastoma . Mol Biosyst. 9(3):467-477. View PubMed abstract
  • Zhang, J.X., Zhang, J., Yan, W., Wang, Y.Y., Han, L., Yue, X., Liu, N., You, Y.P., Jiang, T., Pu, P.Y., et al. (2013) Unique genome-wide map of TCF4 and STAT3 targets using ChIP-seq reveals their association with new molecular subtypes of glioblastoma. Neuro Oncol. doi: 10.1093/neuonc/nos306. View PubMed abstract
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