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IMG: Integrated Microbial Genomes

IMG/M Content

  Datasets
Bacteria   4932
Archaea   184
Eukarya   187
Plasmids   1184
Viruses   2809
Genome Fragments   654
Metagenome   1237
Total Datasets   11187
GEBA   238
    Last updated: 2013-01-17
AMD, Whalefall

The Integrated Microbial Genomes (IMG) system serves as a community resource for analysis and annotation of genome and metagenome datasets in a comprehensive comparative context. The IMG data warehouse integrates genome and metagenome datasets provided by IMG users with a comprehensive set of publicly available isolate and single cell genomes, and a rich set of publicly available metagenome samples.

For details, see IMG Release Notes (Dec. 12, 2012), in particular the workspace and background computation capabilities available to IMG registered users.

    

IMG/M (Nucleic Acids Research, Vol 40, 2012) provides users with tools (IMG/M UI Map) for analyzing their private (password protected access) metagenome samples in the context of all public (free access) genome and metagenome samples in IMG.

IMG/M contains 1237 public metagenome samples distributed as follows:
36
370
831
Bioremediation
3
Air
2
Arthropoda
23
Biotransformation
5
Aquatic
305
Birds
5
Lab enrichment
4
Terrestrial
63
Human
753
Solid waste
11
 
 
Mammals
17
Wastewater
13
 
 
Mollusca
8
 
 
 
 
Plants
22
 
 
 
 
Porifera
3