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Peter Bajcsy Bio - Page 2

Publications

More Journal Publications ....

  • Bajcsy P., "A Perspective on Cyberinfrastructure for Water Research Driven by Informatics Methodologies," Geography Compass, Volume 2, Issue 6 (p 2040-2061), 2008 Blackwell Publishing Ltd, URL: http://www3.interscience.wiley.com/cgi-bin/fulltext/121478978/PDFSTART
  • Kooper R., A. Shirk, S-C. Lee, A. Lin, R. Folberg and P. Bajcsy, "3D Volume Reconstruction Using Web Services," Elsevier International Journal on Computers in Biology and Medicine, Vol. 38/4, pp 490-500; DOI information: 10.1016/j.compbiomed.2008.01.015, 2008
  • Lee S-C. and P. Bajcsy, "Three-dimensional Volume Reconstruction Based on Trajectory Fusion from Confocal Laser Scanning Microscope Images," Journal of Computer Vision and Image Understanding 110 (2008) 19–31.
  • Bajcsy P.,"An Overview of DNA Microarray Image Requirements for Automated Processing," Computer Society of India, Communications, Vol. 30, No. 10, January 2007, Pages 18-23.
  • Lin A., Z. Ai, S-C. Lee, P. Bajcsy, J. Pe'er, L. Leach, A.J. Maniotis, R. Folberg, "Comparing the surface area of looping vasculogenic mimicry patterns with the surface area of blood vessels," Applied Immunohistochemistry and Molecular Morphology (AIMM), Lippincott Williams and Wilkins, March 2007;Vol 15, No. 1, pp. 113–119.
  • Bajcsy P., "An Overview of DNA Microarray Grid Alignment and Foreground Separation Approaches," EURASIP Journal on Applied Signal Processing, Advanced Signal Processing Techniques for Bioinformatics, Volume 2006, Article ID 80163, Pages 1–13.
  • Lee S-C., P. Bajcsy, A. Lin and R. Folberg, "Accuracy Evaluation for Region Centroid-Based Registration of Fluorescent CLSM Imagery" EURASIP Journal on Applied Signal Processing, Special Issue on Performance Evaluation in Image Processing, Hindawi Publishing Corporation, Volume 2006, Article ID 82480, Pages 1–11
  • Lee S-C. L and Bajcsy P., Intensity Correction of Fluorescent Confocal Laser Scanning Microscope Images by Mean-Weight Filtering," Journal of Microscopy, Vol. 221, Pt 2 February 2006, pp. 122–136.
  • Bajcsy P., S-C. Lee, A. Lin and R. Folberg, "3D Volume Reconstruction of Extracellular Matrix Proteins in Uveal Melanoma from Fluorescent Confocal Laser Scanning Microscope Images," Journal of Microscopy, Vol. 221, Pt 1 January 2006, pp. 30–45
  • Bajcsy P., and P. Groves, "Methodology For Hyperspectral Band Selection," Photogrammetric Engineering and Remote Sensing journal, Vol. 70, Number 7, July 2004, pp. 793-802
  • Bajwa S. G., P. Bajcsy, P. Groves, L. F. Tian, "Hyperspectral Image Data Mining for Band Selection in Agricultural Applications, Transactions of the American Society of Agricultural and Biological Engineers (ASAE). Vol. 47(3): 895-907 .2004
  • Bajcsy P. "GridLine: Automatic Grid Alignment in DNA Microarray Scans," IEEE Transactions on Image Processing, VOL 13, NO 1, pp.15-25, January 2004.
  • Chen X., Z. Ai, M. Rasmussen, P. Bajcsy, L. Auvil, M. Welge, L. Leach, S. Vangveeravong, A. J. Maniotis, R. Folberg, "Three-Dimensional Reconstruction of Extravascular Matrix Patterns and Blood Vessels in Human Uveal Melanoma Tissue: Techniques and Preliminary Findings," Investigative Opthalmology & Visual Science (IOVS), Vol. 44, NO. 7, pp. 2834-2840, July 2003.
  • Bajcsy P., D. Sullivan and P. Ryan, "Estimating Weibull Distribution Parameters," Intelligent Engineering Systems Through Artificial Neural Networks, Editors C. Dagli et al., ASME Press, New York, vol. 10, pp. 677-682, November 2000.
  • Bajcsy P., and N. Ahuja, "Hierarchical Clustering of Points Using Similarity Analysis'' IEEE Transactions on Pattern Analysis and Machine Intelligence, VOL. 20, NO. 9, pp. 1011-1015, September 1998.  

More books and book chapters ....

  • Bajcsy P. and Lee S-C, "Registration Decisions during 3D Medical Volume Reconstructions from Confocal Laser Scanning Microscopy," Microscopy Book Series titled "Modern Research and Educational Topics in Microscopy" A. Méndez-Vilas and J. Díaz (Eds.), Vol 2., Applications in Physical/Chemical Sciences, ISBN-13: 978-84-611-9420-9, pp 931-938, 2007, http://www.formatex.org/microscopy3
  • Lee S-C. and P. Bajcsy, "Spatial Intensity Correction of Fluorescent Confocal Laser Scanning Microscope Images, Lecture Notes in Computer Science, in the book entitled Computer Vision Approaches to Medical Image Analysis, Springer Berlin / Heidelberg, Volume 4241/2006, pages 143-154.
  • Bajcsy P., "Data Processing and Analysis," Section IV (pp. 258-378) of the book "Hydroinformatics: Data Integrative Approaches in Computation, Analysis, and Modeling," by Kumar P., J. Alameda, P. Bajcsy, M. Folk and M. Markus, published by CRC Press LLC, 2006, 534p.
  • Bajcsy P., J. Han, L. Liu and J. Young, "Survey of Bio-Data Analysis from Data Mining Perspective," Chapter 2 of Jason T. L. Wang, Mohammed J. Zaki, Hannu T. T. Toivonen, and Dennis Shasha (eds.), Data Mining in Bioinformatics, Springer Verlag, 2004, pp.9-39.    


More Recent Presentations ....

2010:

  1. US workshop on roadmap development for Digital Preservation Interoperability Framework, March 29-31, 2010, NIST Gaithersburg, MD, http://ddp.nist.gov/workshop/program.php;
  2. NARA Archives 2 at College Park, April 1st, 2010;
  3. Yahoo! at Champaign, IL, April 2nd, 2010;
  4. The Advanced Research and Technology Collaboratory for the Americas (ARTCA) working session, March 12th, 2010;
  5. The Archives of American Art, March 17th, 2010;
  6. National Academy of Sciences; The committee on Computing Research for Environmental and Societal Sustainability, May 26th, 2010;
  7. The IARPA workshop, University of Maryland, June 2-3, 2010;
  8. Institutes for Advanced Topics in the Digital Humanities (IATDH) workshop, June 15-16, NCSA Access grid meeting in DC;
  9. 3D Volume Reconstruction from Microscope Imagery: Automation and Medical Community Infrastructure Support, NIST, July 14, 2010;
  10. Exploiting Imaging and Web Technologies to Provide a Comprehensive View of Census Data, 1940 US Census Workshop, College Park, MD, September 13, 2010;
  11. presentation at Wolfram Technology conference in IL; October 13, 2010, http://www.wolfram.com/events/techconf2010/;
  12. presentations at Imaging at Illinois workshop in IL, October 14-15, 2010, http://www.imaging.beckman.illinois.edu/imaging2010/;
  13. presentation at the Workshop on Digital Preservation of Complex Engineering Data in WV, October 20-22, 2010;
  14. presentation at the Gordon Challenge in Data-Intensive Discovery conference in CA, October 26-29, 2010, http://www.sdsc.edu/gordongrandchallenge/;
  15. Supercomputing Conference 2010, NSF funded panel on supercomputing in humanities, New Orleans, Louisiana , November 14-16, 2010; http://sc10.supercomputing.org/schedule/event_detail.php?evid=stpan108
  16. Department of Defense (DoD)/Manufacturing Systems Integration Division (MSID) Summit on Model-Based Enterprise (MBE), Technical Data Package and Configuration Management, December 13-16, 2010, NIST Gaithersburg, MD.    


Community Services

  1. A reviewer of the NSF Review Panels for Division of Informative Biology and Division of Information & Intelligent Systems, 2004 (twice), 2005 (twice), 2009 (once), 2010 (three times)
  2. A member of the NIST advisory board for the SHIELD project 2003-2004,
  3. A reviewer for the U.S. Civilian Research and Development Foundation (CRDF) 2006 & 2008,
  4. A reviewer for the Science Center programs of the U.S. Department of State 2008.
  5. A reviewer for the National Research Council of the National Academies 2011.
  6. An associate editor for the ACM Transactions on Multimedia Computing Communications and Applications 2010,
  7. A program committee member on the IEEE Workshop on Computer Vision Methods for Bioinformatics, San Diego, June 2005 (in conjunctions with IEEE CVPR 2005), on the Workshop on Mining Engineering and Scientific Datasets (in conjunction with the 2006 SIAM conference), and on the International Conference on Machine Learning and Applications (ICMLA'07 & 08 & 09),
  8. A member and reviewer on the Technical Advisory Committee of the First International Conference on Intelligent Interactive Technologies and Multimedia, Dec 28-30, 2010 Allahabad, India, http://iitm.iiita.ac.in/ 


Teaching Experience

Courses and Workshops:

Guest Lectures:

  • Bio-medical image processing: Department of Statistics seminar at UIUC, Fall 2010.
  • Tele-immersive environments: Computer Graphics seminar in Computer Science Department at UIUC, Fall 2010.
  • Introduction to Advanced Computing in Humanities, Arts, and Social Science: Afro498/598 at UIUC, Spring 2009.
  • Mining microarray data: Bioinformatics Seminar CS591-HLZ at UIUC, Fall 2005, (see course description at http://ilabs.inquiry.uiuc.edu/ilab/biosem)
  • Quality control of cDNA microarray images: Bioinformatics Seminar CS591-HLZ at UIUC, Spring 2005, (see course description at http://ilabs.inquiry.uiuc.edu/ilab/biosem)
  • Microarray image analyses: Bioinfomatics seminar ANSCI490 at UIUC, Fall 2002.