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  2. Adami, C., Digital genetics: unravelling the genetic basis of evolution. Nat Rev Genet, 2006. 7(2): p. 109-18.
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  4. Bissell, M.J. and M.A. Labarge, Context, tissue plasticity, and cancer: are tumor stem cells also regulated by the microenvironment? Cancer Cell, 2005. 7(1): p. 17-23.
  5. Bonci, D., et al., The miR-15a-miR-16-1 cluster controls prostate cancer by targeting multiple oncogenic activities. Nat Med, 2008. 14(11): p. 1271-7.
  6. Chin, S.F., et al., High-resolution aCGH and expression profiling identifies a novel genomic subtype of ER negative breast cancer. Genome Biol, 2007. 8(10): p. R215.
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  9. Dykxhoorn, D.M., C.D. Novina, and P.A. Sharp, Killing the messenger: short RNAs that silence gene expression. Nat Rev Mol Cell Biol, 2003. 4(6): p. 457-67.
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  11. Gatenby, R.A. and B.R. Frieden, Information theory in living systems, methods, applications, and challenges. Bull Math Biol, 2007. 69(2): p. 635-57.
  12. Gerlich, D., et al., Global chromosome positions are transmitted through mitosis in mammalian cells. Cell, 2003. 112(6): p. 751-64.
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  20. Lau, N.C., et al., An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans. Science, 2001. 294(5543): p. 858-62.
  21. Lee, R.C. and V. Ambros, An extensive class of small RNAs in Caenorhabditis elegans. Science, 2001. 294(5543): p. 862-4.
  22. Lee, R.C., R.L. Feinbaum, and V. Ambros, The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14. Cell, 1993. 75(5): p. 843-54.
  23. Lippincott-Schwartz, J., Dynamics of secretory membrane trafficking. Ann N Y Acad Sci, 2004. 1038: p. 115-24.
  24. Lyakhov, I.G., A. Krishnamachari, and T.D. Schneider, Discovery of novel tumor suppressor p53 response elements using information theory. Nucleic Acids Res, 2008. 36(11): p. 3828-33.
  25. Ma, J., et al., The infinite sites model of genome evolution. Proc Natl Acad Sci U S A, 2008. 105(38): p. 14254-61.
  26. Misteli, T., Beyond the sequence: cellular organization of genome function. Cell, 2007. 128(4): p. 787-800.
  27. Morin, R.D., et al., Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells. Genome Res, 2008. 18(4): p. 610-21.
  28. Mumm, J.P., A. Landy, and J. Gelles, Viewing single lambda site-specific recombination events from start to finish. EMBO J, 2006. 25(19): p. 4586-95.
  29. Neilson, J.R. and P.A. Sharp, Small RNA regulators of gene expression. Cell, 2008. 134(6): p. 899-902.
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  31. Phillips, R., J. Kondev, and J. Theriot, Physical biology of the cell. 2009, New York: Garland Science. xxiv, 807 p.
  32. Phillips, R. and Q.S. R., The biological frontier of physics. Phys Today, 2006. 59(5): p. 38-43.
  33. Poirier, M.G., et al., Spontaneous access to DNA target sites in folded chromatin fibers. J Mol Biol, 2008. 379(4): p. 772-86.
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  36. Shannon, C.E., Communication in the presence of noise. Proc IRE, 1949. 37(1): p. 10-21.
  37. Shibata, D. and S. Tavare, Counting divisions in a human somatic cell tree: how, what and why? Cell Cycle, 2006. 5(6): p. 610-4.
  38. Small, S., A. Blair, and M. Levine, Regulation of even-skipped stripe 2 in the Drosophila embryo. EMBO J, 1992. 11(11): p. 4047-57.
  39. Sonnenschein, C. and A.M. Soto, Theories of carcinogenesis: an emerging perspective. Semin Cancer Biol, 2008. 18(5): p. 372-7.
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